Benchmarks wont run

Just a quick idea: Could this be related to the different line ending handling of Linux and Windows?


Dipl.-Hydrol. Marc Walther

Department of Environmental Informatics

Helmholtz Centre for Environmental Research - UFZ

Permoserstraße 15, 04318 Leipzig, Germany

Phone +49 341 235 18 82

Fax +49 341 235 19 39

Mobile +49 178 334 18 19

Email marc.walther@ufz.de

Web http://www.ufz.de

Helmholtz-Zentrum für Umweltforschung GmbH - UFZ

Registered Office: Leipzig

Registration Office: Amtsgericht Leipzig

Trade Register Nr. B 4703

Chairman of the Supervisory Board: MinR Wilfried Kraus

Scientific Director: Prof. Dr. Georg Teutsch

Administrative Director: Dr. Heike Graßmann


···

-- --------------------------------------------------------------------- Dr. Thomas Kalbacher Department of Environmental Informatics Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Helmholtz Centre for Environmental Research - UFZ phone +49 (0) 0341 235 1093 / fax +49 (0) 0341 235 1939 / Sitz der Gesellschaft: Leipzig /Registergericht: Amtsgericht Leipzig, Handelsregister Nr. B 4703 / Vorsitzender des Aufsichtsrats: MinDirig Wilfried Kraus / Wissenschaftlicher Geschäftsführer: Prof. Dr. Georg Teutsch / Administrativer Geschäftsführer: Dr. Heike Graßmann --------------------------------------------------------------------- The OpenGeoSys Project: ---------------------------------------------------------------------

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I do not think so because besides checking the line endings, I also tried to run the benchmarks both in windows and linux (they needed conversion for linux).

···

Am 25.03.14 18:30, schrieb Marc Walther:

    Just a quick idea: Could this be related to the different line ending handling of Linux and Windows?

    Sent from mobile device, please excuse spelling mistakes.

Dipl.-Hydrol. Marc Walther

Department of Environmental Informatics

    Helmholtz Centre for Environmental Research - UFZ

    Permoserstraße 15, 04318 Leipzig, Germany

Phone +49 341 235 18 82

    Fax       +49 341 235 19 39

    Mobile    +49 178 334 18 19
    Email       Web

Helmholtz-Zentrum für Umweltforschung GmbH - UFZ

    Registered Office: Leipzig

    Registration Office: Amtsgericht Leipzig

    Trade Register Nr. B 4703

    Chairman of the Supervisory Board: MinR Wilfried Kraus

    Scientific Director: Prof. Dr. Georg Teutsch

    Administrative Director: Dr. Heike Graßmann

    Am 25.03.2014 17:02 schrieb Thomas Kalbacher :
-- Wolf Tilmann Pfeiffer Geohydromodelling Institute of Geoscience Christian-Albrechts-University of Kiel Ludewig-Meyn-Strasse 10, 24118 Kiel, Germany phone: 0049 (0)431 880-4805 mail:

marc.walther@ufz.de
http://www.ufz.dethomas.kalbacher@ufz.de

Hi Georg and Tilmann,

       it seems not to be related to reading the gli-surface names, which I modified.

      However I will have a  closer look at it tomorrow.



      best

      Thomas







      Am 25.03.2014 16:56, schrieb Georg Kosakowski:

Hoi, regarding the problems with the gli-files, please talk to Thomas Kallbacher. I would guess this is related to some changes he introduced into the trunk a short while ago. Greetings, Georg On 03/25/2014 04:48 PM, Wolf Tilmann Pfeiffer wrote:

Hello all, while comparing some stuff today I tried to run the MULTIPHASE Benchmarks (fresh checkout) using the current trunk version. For some reason only the KueperProblem-PcPnw works out of the box (on the machines I tested). Maybe you guys have an idea what is going on: - The BuckleyLeverett Benchmark fails due to the *.gli file which is missing the name of a point used in the *.bc file. When this is corrected the benchmark fails in function void LegacyVtkInterface::WriteVTKDataArrays(fstream &vtk_file) const in line if (_pointArrayNames[k].find("_X") != string::npos && _pointArrayNames[k + 1].find("_Y") != string::npos) for k=5 since the vector _pointArraynames has just 6 entries. - The KueperProblem-PcPnw Benchmark works if the #ID tag in the *.gli is changed to #NAME - The McWortherProblem tries to use a linear solver which is not supported (805) The latter two problems are rather easy fix if I do not miss anything. Oh, I tested this on windows & linux using the latest trunk version of both the benchmarks as well as the source code. Best regards, Tilmann

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-- --------------------------------------------------------------------- Dr. Thomas Kalbacher Department of Environmental Informatics Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Helmholtz Centre for Environmental Research - UFZ phone +49 (0) 0341 235 1093 / fax +49 (0) 0341 235 1939 / Sitz der Gesellschaft: Leipzig /Registergericht: Amtsgericht Leipzig, Handelsregister Nr. B 4703 / Vorsitzender des Aufsichtsrats: MinDirig Wilfried Kraus / Wissenschaftlicher Geschäftsführer: Prof. Dr. Georg Teutsch / Administrativer Geschäftsführer: Dr. Heike Graßmann --------------------------------------------------------------------- The OpenGeoSys Project: ---------------------------------------------------------------------

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wtp@gpi.uni-kiel.de

Dear Wolf Tilmann Pfeiffer,

This has been a chronic problem since the start. New versions can not solve the problems used to be solved no problem with previous versions. I have added those benchmarks to develop and test multiphase flow modules for a variety of problems. Some modules are very picky in matrix solvers due to the numerical stability caused by the choice of the primary variables, while some modules are not. If you’re interested in, check this paper out ( http://www.sciencedirect.com/science/article/pii/S002199911100458X ). Those (McWhorter, Kueper, and so on) are paper-quality benchmarks backed by experiments and published by scientists with fame a long ago. In fact, the relevant topics with this particular multiphase modules in OGS were published in the journals several years back including PET2OGS paper recently and others. Now I am hearing those are not working with recent contribution of OGS, again. In fact, this is not the first time in doing the things again in the framework of philosophy that single OGS trunk does it all.

My personal recommendation to you Wolf, is to go back to the version that works for you unless your work depends on the new contribution made by the new version and customise freely for your work from there. This is how I do for my work. I am still with 4.10 and happy with it. Of course, I have numerous variants in my branch. But, these variants are still in the name of OGS just not the mighty single trunk OGS. We have a bunch of linux variants. Just like that.

Kind regards,

Chan-Hee

···

On Wed, Mar 26, 2014 at 3:47 AM, Wolf Tilmann Pfeiffer wtp@gpi.uni-kiel.de wrote:

I do not think so because besides checking the line endings, I also tried to run the benchmarks both in windows and linux (they needed conversion for linux).


  Am 25.03.14 18:30, schrieb Marc Walther:
    Just a quick idea: Could this be related to the different line ending handling of Linux and Windows?

    Sent from mobile device, please excuse spelling mistakes.

Dipl.-Hydrol. Marc Walther

Department of Environmental Informatics

    Helmholtz Centre for Environmental Research - UFZ

    Permoserstraße 15, 04318 Leipzig, Germany

Phone +49 341 235 18 82

    Fax       +49 341 235 19 39

    Mobile    +49 178 334 18 19

Email marc.walther@ufz.de

    Web       [http://www.ufz.de](http://www.ufz.de)

Helmholtz-Zentrum für Umweltforschung GmbH - UFZ

    Registered Office: Leipzig

    Registration Office: Amtsgericht Leipzig

    Trade Register Nr. B 4703

    Chairman of the Supervisory Board: MinR Wilfried Kraus

    Scientific Director: Prof. Dr. Georg Teutsch

    Administrative Director: Dr. Heike Graßmann

    Am 25.03.2014 17:02 schrieb Thomas Kalbacher <thomas.kalbacher@ufz.de>:

Hi Georg and Tilmann,

       it seems not to be related to reading the gli-surface names, which I modified.

      However I will have a  closer look at it tomorrow.



      best

      Thomas







      Am 25.03.2014 16:56, schrieb Georg Kosakowski:

Hoi, regarding the problems with the gli-files, please talk to Thomas Kallbacher. I would guess this is related to some changes he introduced into the trunk a short while ago. Greetings, Georg On 03/25/2014 04:48 PM, Wolf Tilmann Pfeiffer wrote:

Hello all, while comparing some stuff today I tried to run the MULTIPHASE Benchmarks (fresh checkout) using the current trunk version. For some reason only the KueperProblem-PcPnw works out of the box (on the machines I tested). Maybe you guys have an idea what is going on: - The BuckleyLeverett Benchmark fails due to the *.gli file which is missing the name of a point used in the *.bc file. When this is corrected the benchmark fails in function void LegacyVtkInterface::WriteVTKDataArrays(fstream &vtk_file) const in line if (_pointArrayNames[k].find("_X") != string::npos && _pointArrayNames[k + 1].find("_Y") != string::npos) for k=5 since the vector _pointArraynames has just 6 entries. - The KueperProblem-PcPnw Benchmark works if the #ID tag in the *.gli is changed to #NAME - The McWortherProblem tries to use a linear solver which is not supported (805) The latter two problems are rather easy fix if I do not miss anything. Oh, I tested this on windows & linux using the latest trunk version of both the benchmarks as well as the source code. Best regards, Tilmann












-- --------------------------------------------------------------------- Dr. Thomas Kalbacher Department of Environmental Informatics Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Helmholtz Centre for Environmental Research - UFZ phone +49 (0) 0341 235 1093 / fax +49 (0) 0341 235 1939 thomas.kalbacher@ufz.de / [http://www.ufz.de](http://www.ufz.de)

Sitz der Gesellschaft: Leipzig /Registergericht: Amtsgericht Leipzig, Handelsregister Nr. B 4703 / Vorsitzender des Aufsichtsrats: MinDirig Wilfried Kraus / Wissenschaftlicher Geschäftsführer: Prof. Dr. Georg Teutsch / Administrativer Geschäftsführer: Dr. Heike Graßmann --------------------------------------------------------------------- The OpenGeoSys Project: [http://www.opengeosys.org/forum](http://www.opengeosys.org/forum)
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-- Wolf Tilmann Pfeiffer Geohydromodelling Institute of Geoscience Christian-Albrechts-University of Kiel Ludewig-Meyn-Strasse 10, 24118 Kiel, Germany phone: 0049 (0)431 880-4805
mail: wtp@gpi.uni-kiel.de


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